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beadarrayFilter (version 1.1.0)

Bead filtering for Illumina bead arrays

Description

This package contains functions to fit the filtering model of Forcheh et al., (2012) which is used to derive the intra-cluster correlation (ICC). Model fitting is done using the modified version of the ``MLM.beadarray" function of Kim and Lin (2011).

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Version

Install

install.packages('beadarrayFilter')

Monthly Downloads

68

Version

1.1.0

License

GPL-2

Maintainer

Last Published

February 7th, 2013

Functions in beadarrayFilter (1.1.0)

MLM.beadarray

Multi-level Mixed model
iccFun

Intra-cluster correlations (ICC) for Illumina bead arrays
varianceplot

Observe between-array and within-array variances.
emCDF

Function to plot the empirical cumulative density functions (ecdf)
beadtypeFilter

Filter Illumina bead arrays