binGroup2 (version 1.1.0)

gtRegControl: Auxiliary for controlling group testing regression

Description

Auxiliary function to control fitting parameters of the EM algorithm used internally in gtReg for simple pooling (type = "sp") with method = "Xie" or for array testing (type = "array").

Usage

gtRegControl(
  tol = 1e-04,
  n.gibbs = 1000,
  n.burnin = 20,
  maxit = 500,
  trace = FALSE,
  time = TRUE
)

Arguments

tol

convergence criterion

n.gibbs

the Gibbs sample size to be used in each E step of the EM algorithm, for array testing. The default is 1000.

n.burnin

the number of samples in the burn-in period, for array testing. The default is 20.

maxit

maximum number of iterations in the EM algorithm.

trace

a logical value indicating whether the output should be printed for each iteration. The default is FALSE.

time

a logical value indicating whether the length of time for the model fitting should be printed. The default is TRUE.

Value

A list with components named as the input arguments.

Examples

# NOT RUN {
# The default settings:
gtRegControl()
# }