potential_swaps


Potential swap moves for TF-target and miRNA-target networks (see genestes data set) used for the simulation in the vignette.


datasets

Expression levels of mRNA molecules are regulated by
different processes, comprising inhibition or activation by
transcription factors and post-transcriptional degradation by
microRNAs. birta (Bayesian Inference of Regulation of
Transcriptional Activity) uses the regulatory networks of TFs
and miRNAs together with mRNA and miRNA expression data to
predict switches in regulatory activity between two conditions.
A Bayesian network is used to model the regulatory structure
and Markov-Chain-Monte-Carlo is applied to sample the activity
states.

Benedikt Zacher

birta

Bayesian Inference of Regulation of Transcriptional Activity

potential_swaps function

A list containing potential swap moves for the TF- and miRNA-target graph used in the simulation.

Format

Potential swap moves for TF-target and miRNA-target networks (see genestes data set) used for the simulation in the vignette.

potential_swaps: Potential swap moves for TF-target and miRNA-target networks (see genestes data set).

Description

Usage

Arguments

Format