coloc
or colocBayes
objectExtract information from a coloc
object.
eta(object)
Object returned by coloc.test()
or coloc.bma()
functions.
eta()
returns eta.hat, the maximum likelihood value of eta.
theta()
returns theta.hat, the maximum likelihood value of eta.
summary()
returns a summary, giving eta, chisquare statistic, number of SNPs/PCs, p value and, if a colocBayes
object, the ppp.value
ci()
returns the credible interval, or NA
if not calculated.