clean_taxa_names

Renames taxa to have short human-readable names

Statistical modeling for correlated count data using the beta-binomial distribution, described in Martin et al. (2020) <doi:10.1214/19-AOAS1283>. It allows for both mean and overdispersion covariates.

Amy D Willis

corncob

Count Regression for Correlated Observations with the
Beta-Binomial

Bryan D Martin

Daniela Witten

Sarah Teichman

Thomas W Yee

Xiangjie Xue

clean_taxa_names function

<dl><dt>x</dt>
<dd>Object of class <code>phyloseq</code></dd>
<dt>name</dt>
<dd>Character, defaults to <code>"OTU"</code>. Optional. String to use in every taxa name.</dd></dl>

Arguments

Rename taxa — clean_taxa_names

<dl>

<dt>x</dt>
<dd>Object of class <code>phyloseq</code></dd>


<dt>name</dt>
<dd>Character, defaults to <code>"OTU"</code>. Optional. String to use in every taxa name.</dd>

</dl>

clean_taxa_names: Rename taxa

Description

Usage

Value

Arguments

Details