dpcR (version 0.1.2-1)

plot-qpcrpp: Plot qpcrpp objects

Description

An analytical plot describing relationship between the cycle number and the current value of Poisson mean. The plot can be used for quality control of process.

Usage

## S3 method for class 'qpcrpp':
plot(x, mincyc = 1, maxcyc = 45, rug = TRUE)

Arguments

x

is a qpcrpp object.

mincyc

is the first cycle to start the plot from.

maxcyc

the the last cycle for the plot.

rug

Adds a rug representation of the data to the plot.

Details

The rug parameter allows user to add density of the number of events to the plot.

See Also

qpcrpp

Examples

test <- cbind(reps[1L:45, ], reps2[1L:45, 2L:ncol(reps2)], reps3[1L:45, 
	      2L:ncol(reps3)])
ranged <- limit_cq(data = test, cyc = 1, fluo = NULL, model = l5)
        
plot(qpcr2pp(ranged[, 1], ranged[, 2], delta = 5), rug = TRUE)