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dti

The goal of dti is to provide tools to analysis of Diffusion Weighted Imaging (DWI) Data.

Installation

You can install dti from GitHub with:

# install.packages("devtools")
devtools::install_github("muschellij2/dti")

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Version

Install

install.packages('dti')

Monthly Downloads

753

Version

1.5.4.3

License

GPL (>= 2)

Maintainer

Karsten Tabelow

Last Published

September 26th, 2024

Functions in dti (1.5.4.3)

getmask-methods

Methods for Function `getmask' in Package `dti'
getsdofsb-methods

Estimate the noise standard deviation
setmask-methods

Methods for Function `setmask' in Package `dti'
extract-methods

Methods for Function `extract' and `[' in Package `dti'
tracking-methods

Methods for Function `tracking' in Package `dti'
dwiSqrtODF-methods

Methods for positive definite EAP and ODF estimation in Package dti
show-methods

Methods for Function `show' in Package `dti'
sdpar-methods

Methods for Function `sdpar' in Package `dti'
readDWIdata

Read Diffusion Weighted Data
medinria

Read/Write Diffusion Tensor Data from/to NIFTI File
optgradients

Optimal gradient directions for number of gradients between 6 and 162
optgrad

Optimal gradient directions
subsetg

Create an objects of class "dtiData" containing only a subset of gradient directions.
plot-methods

Methods for Function `plot' in Package `dti'
summary-methods

Methods for Function `summary' in Package `dti'
show3d-methods

Methods for Function `show3d' in Package `dti'
showFAColorScale

Writes an image with the colqFA colorscale to disk.
dti.options

Set and manipulate image orientations for plots.
dti-package

tools:::Rd_package_title("dti")
colqFA

FA map color scheme
combineDWIdata

Combine two objects of class "dtiData")
awssigmc

Estimate noise variance for multicoil MR systems
AdjacencyMatrix

Create an adjacency matrix from fiber tracking results
dtiTensor-methods

Methods for Function `dtiTensor' in Package `dti'
dwi.smooth-methods

Smooth DWI data
dwiMD-methods

Methods for Mean Diffusivity in Package `dti'
dti.smooth-methods

Methods for Function `dti.smooth' in Package `dti'
dwiMixtensor-methods

Methods for Function `dwiMixtensor' in Package `dti'
dwi-class

Class "dwi"
dtiIndices-methods

Methods for Function `dtiIndices' in Package `dti'
dkiTensor-methods

Diffusion Kurtosis Imaging (DKI)
polyeder

Polyeders derived from the Icosahedron (icosa0) by sequential triangulation of surface triangles
print-methods

Methods for Function `print' in Package `dti'
dwiRiceBias-methods

Correction for Rician Bias
dwiQball-methods

Methods for Function `dwiQball' in Package `dti'