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dynpred (version 0.1.2)

Companion Package to "Dynamic Prediction in Clinical Survival Analysis"

Description

The dynpred package contains functions for dynamic prediction in survival analysis.

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Version

Install

install.packages('dynpred')

Monthly Downloads

271

Version

0.1.2

License

GPL (>= 2)

Maintainer

Hein Putter

Last Published

July 13th, 2015

Functions in dynpred (0.1.2)

AUC

Calculate AUC(t) curve
EBMT data

Data from the European Society for Blood and Marrow Transplantation (EBMT)
dynpred-package

The companion package of the book "Dynamic Prediction in Survival Analysis"
Ovarian cancer data

Data originate from two clinical trials on the use of different combination chemotherapies, carried out in The Netherlands around 1980
cindex

Calculate Harrell's c-index
CVPL

Calculate cross-validated log-partial likelihood (with shrinkage)
CVcindex

Calculate cross-validated c-index
pe

Calculate prediction error curve
deb

Debugging function
pew

Calculate dynamic prediction error curve
evalstep

Evaluate step function at a set of new time points
cutLM

Create landmark data set
scatterplot

Create scatter plot with imputed survival times
NKI breast cancer clinical data

Clinical and follow-up data of breast cancer patients as collected in the Dutch Cancer Institute (NKI) in Amsterdam
WBC measurements data

Data from the Benelux CML study
toleranceplot

Create a tolerance plot
WBC follow-up data

Data from the Benelux CML study
Fwindow

Calculate dynamic "death within window" curve
AUCw

Calculate dynamic AUC(t) curve