fracprolif (version 1.0.7)

Fraction Proliferation via a Quiescent Growth Model

Description

Functions for fitting data to a quiescent growth model, i.e. a growth process that involves members of the population who stop dividing or propagating.

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Version

Install

install.packages('fracprolif')

Monthly Downloads

196

Version

1.0.7

License

GPL-2 | file LICENSE

Maintainer

Shawn Garbett

Last Published

May 17th, 2018

Functions in fracprolif (1.0.7)

ca1d.erlotinib

CA1d cells in 16 micromolar erlotinib

ca1d.erlotinib.totals

CA1d cell counts in various concentrations erlotinib

q.mle.emg.estimate

Estimate Distribution Parameters based on EMG survival

q.mle.norm.estimate

Estimate Distribution Parameters based on EMG survival

prolif_d

Expected Propagating Subpopulation

fracprolif-package

Fractional Proliferation.

q.rates

Estimate Quiescence-Growth Model Rates

split

Piecewise curves for rates which change in the middle of an experiment

qsurvival.nllik

Negative Log-Likelihood of a Survival Function

prolif_q

Expected Quiescent Subpopulation

prolif_tot

Expected Proliferation Total

qrate-class

Class "qrate"

prolif_fd

Fraction of Population Propagating

prolif_fq

Fraction of Population Quiescent