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gMCP (version 0.8-17)
Graph Based Multiple Comparison Procedures
Description
Functions and a graphical user interface for graphical described multiple test procedures.
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Install
install.packages('gMCP')
Monthly Downloads
761
Version
0.8-17
License
GPL (>= 2)
Issues
11
Pull Requests
0
Stars
10
Forks
1
Repository
https://github.com/kornl/gMCP
Maintainer
Kornelius Rohmeyer
Last Published
March 25th, 2024
Functions in gMCP (0.8-17)
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generateWeights
generateWeights
gMCPResult-class
Class gMCPResult
generateBounds
generateBounds
generatePvals
generatePvals
gMCPReport
Automatic Generation of gMCP Reports
gMCP-package
Graphical described Multiple Comparison Procedures
getJavaInfo
Get Memory and Runtime Info from JVM
parametric.test
Weighted parametric test
gMCP.extended
Graph based Multiple Comparison Procedures
gMCP
Graph based Multiple Comparison Procedures
joinGraphs
Joins two graphMCP objects
gPADInterim-class
Class gPADInterim
graph2latex
Graph2LaTeX
matrix2graph
Matrix2Graph and Graph2Matrix
graphMCP-class
Class graphMCP
generateTest
generateTest
graphGUI
Graphical User Interface for graphical described multiple comparison procedures
sampSizeCore
Function for sample size calculation
sampSize
Sample size calculations
weighted.test.functions
Weighted Test Functions for use with gMCP
graphAnalysis
Analysis of a gMCP-Graph
hydroquinone
Hydroquinone Mutagenicity Assay
replaceVariables
Replaces variables in a general graph with specified numeric values
rejectNode
Rejects a node/hypothesis and updates the graph accordingly.
graphTest
Multiple testing using graphs
placeNodes
Placement of graph nodes
rqmvnorm
Random sample from the multivariate normal distribution
simes.test
Weighted Simes test
simes.on.subsets.test
Simes on subsets, otherwise Bonferroni
secondStageTest
EXPERIMENTAL: Construct a valid level alpha test for the second stage of an adaptive design that is based on a pre-planned graphical MCP
unitTestsGMCP
Run the R unit (and optional the JUnit) test suite for gMCP
plotSimCI
Plot confidence intervals
substituteEps
Substitute Epsilon
simvastatin
Simvastatin and Colesevelam Treatment in Patients with Primary Hypercholesterolemia
subgraph
Get a subgraph
bdiagNA
Create a Block Diagonal Matrix with NA outside the diagonal
bonferroni.test
Weighted Bonferroni-test
entangledMCP-class
Class entangledMCP
bonferroni.trimmed.simes.test
Trimmed Simes test for intersections of two hypotheses and otherwise weighted Bonferroni-test
calcPower
Calculate power values
extractPower
Calculate power values
doInterim
EXPERIMENTAL: Evaluate conditional errors at interim for a pre-planned graphical procedure
exampleGraphs
Functions that create different example graphs
simConfint
Simultaneous confidence intervals for sequentially rejective multiple test procedures
corMatWizard
Graphical User Interface for the creation of correlation matrices