rejectNode

Rejects a node/hypothesis and updates the graph accordingly.

htest

graphs

Functions and a graphical user interface for graphical described
multiple test procedures.

Kornelius Rohmeyer

gMCP

Graph Based Multiple Comparison Procedures

Florian Klinglmueller

rejectNode function

<dl><dt>graph</dt>
<dd>A graph of class <code>graphMCP</code> or <code>entangledMCP</code>.</dd>
<dt>node</dt>
<dd>A character string specifying the node to reject.</dd>
<dt>upscale</dt>
<dd>Logical. If <code>upscale=TRUE</code> then the weights of all non-rejected
nodes are scaled so that the sum is equal to 1. This forces <code>keepWeights=FALSE</code>
to reduce confusion, since otherwise the sum of weights could become bigger than 1.</dd>
<dt>verbose</dt>
<dd>Logical scalar. If <code>TRUE</code> verbose output is generated
during sequentially rejection steps.</dd>
<dt>keepWeights</dt>
<dd>Logical scalar. If <code>FALSE</code> the weight of a node
without outgoing edges is set to 0 if it is removed. Otherwise it keeps its
weight.</dd></dl>

Arguments

Kornelius Rohmeyer <a href="/link/rohmeyer%40small-projects.de?package=gMCP&version=0.8-17" data-mini-rdoc="gMCP::rohmeyer@small-projects.de">rohmeyer@small-projects.de</a>

Author

Rejects a node/hypothesis and updates the graph accordingly. — rejectNode

<dl>

<dt>graph</dt>
<dd>A graph of class <code>graphMCP</code> or <code>entangledMCP</code>.</dd>


<dt>node</dt>
<dd>A character string specifying the node to reject.</dd>


<dt>upscale</dt>
<dd>Logical. If <code>upscale=TRUE</code> then the weights of all non-rejected
nodes are scaled so that the sum is equal to 1. This forces <code>keepWeights=FALSE</code>
to reduce confusion, since otherwise the sum of weights could become bigger than 1.</dd>


<dt>verbose</dt>
<dd>Logical scalar. If <code>TRUE</code> verbose output is generated
during sequentially rejection steps.</dd>


<dt>keepWeights</dt>
<dd>Logical scalar. If <code>FALSE</code> the weight of a node
without outgoing edges is set to 0 if it is removed. Otherwise it keeps its
weight.</dd>

</dl>

Kornelius Rohmeyer <a href='mailto:rohmeyer@small-projects.de'>rohmeyer@small-projects.de</a>

rejectNode: Rejects a node/hypothesis and updates the graph accordingly.

Description

Usage

Value

Arguments

Author

Details

References

See Also

Examples