Usage
read.spot(file.name, cy3, cy5, bg.cy3, bg.cy5, ids, symdesc, header =
FALSE, sep = "\t", is.ifc = FALSE, envir)
Arguments
file.name
a connection or a character string giving the
name of the file to read where each column represent the spot components.
cy3
column that represent Cy3.
cy5
column that represent Cy5.
bg.cy3
column that represent BgCy3.
bg.cy5
column that represent BgCy5.
ids
column that represent Id.
symdesc
(optional) identifier besides Id column.
header
the logical value of the header input file
sep
the separator in the inputfile
is.ifc
If is.ifc = TRUE this experiment was done in the
Unit of Microarray from Cellular Phisiology Institute.
envir
Environment where are the genArise variables. You don't
need to specify this argument.