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lymphclon (version 1.3.0)

Accurate Estimation of Clonal Coincidences and Abundances from Biological Replicates

Description

We provide a clonality score estimator that takes full advantage of the multi-biological-replicate structure of modern sequencing experiments; it specifically takes into account the reality that, typically, the clonal coverage is well below 0.1%.

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Install

install.packages('lymphclon')

Monthly Downloads

80

Version

1.3.0

License

LGPL-2

Maintainer

Yi Liu

Last Published

November 11th, 2014

Functions in lymphclon (1.3.0)

generate.clonal.data

generate.clonal.data (part of lymphclon package)
lymphclon-package

Estimates the clonality score from replicate of abundances data
infer.clonality

infer.clonality (part of lymphclon package)