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omicade4 (version 1.12.0)

Multiple co-inertia analysis of omics datasets

Description

Multiple co-inertia analysis of omics datasets

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Version

Version

1.12.0

License

GPL-2

Maintainer

Chen Meng

Last Published

February 15th, 2017

Functions in omicade4 (1.12.0)

topVar.cia

Selecting top weighted variables (genes) from result of CIA
selectVar.mcia

Selecting variables from result of MCIA
plotVar

Plot variable (gene) spaces of result from MCIA or CIA
NCI60_4arrays

Microarray gene expression profiles of the NCI 60 cell lines from 4 different platforms
selectVar

Selecting variables (genes) from result of MCIA or CIA according to co-ordinates
topVar

Selecting top weighted variables (genes) from result of MCIA or CIA
selectVar.cia

Selecting variables from result of CIA
plotVar.cia

Plot variable space of result from cia
mcia

multiple co-inertia analysis
plotVar.mcia

Plot variable space of result from mcia
topVar.mcia

Selecting top weighted variables (genes) from result of MCIA
omicade4-package

multiple co-inertia analysis of omics datasets