pheno2geno (version 1.4.0)

qtl.comparison.plot: Comparison of qtl profiles.

Description

Plots comparison between the qtl profiles of two cross objects.

Usage

qtl.comparison.plot(cross1, cross2, chr, ...)

Arguments

cross1

An object of class cross. See read.cross for details.

cross2

An object of class cross. See read.cross for details.

chr

Specifies the chromosome to be shown (only one chromosome can be plotted at a time.

...

Arguments passed to scanone function (see scanone).

Value

Matrix of comparisons between chromosomes obtained using comparison method.

Details

Plots markers from moth old and new map as points and in the background - comparison between them done using selected comparison method.

See Also

• plotMapComparison - Plotting routine for comparison of two genetic maps.

• projectOldMarkers - Plotting routine for showing how markers from original map are placed on saturated map.

• cross.saturate - Saturate existing map.

• cross.denovo - Create de novo genetic map or chromosome assignment vector.

Examples

# NOT RUN {
	data(testCross)
	qtl.comparison.plot(testCross,testCross)
# }