estimate_GIC

Function to estimate the GIC per homologue using IBD probabilities

Quantitative trait loci (QTL) analysis and exploration of meiotic patterns in
autopolyploid bi-parental F1 populations.
For all ploidy levels, identity-by-descent (IBD) probabilities can be estimated.
Significance thresholds, exploring QTL allele effects and visualising results are provided.
For more background and to reference the package see <doi:10.1093/bioinformatics/btab574>.

Peter Bourke

polyqtlR

QTL Analysis in Autopolyploid Bi-Parental F1 Populations

Christine Hackett

Chris Maliepaard

Geert van Geest

Roeland Voorrips

Johan Willemsen

estimate_GIC function

<dl><dt>IBD_list</dt>
<dd>List of IBD probabilities</dd></dl>

Arguments

Estimate the Genotypic Information Coefficient (GIC) — estimate_GIC

<dl>

<dt>IBD_list</dt>
<dd>List of IBD probabilities</dd>

</dl>

estimate_GIC: Estimate the Genotypic Information Coefficient (GIC)

Description

Usage

Value

Arguments

Examples