polyqtlR

polyqtlR-package

Quantitative trait loci (QTL) analysis and exploration of meiotic patterns in autopolyploid bi-parental F1 populations. For all ploidy levels, identity-by-descent (IBD) probabilities can be estimated. Significance thresholds, exploring QTL allele effects and visualising results are provided. For more background and to reference the package see tools:::Rd_expr_doi("10.1093/bioinformatics/btab574").

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Quantitative trait loci (QTL) analysis and exploration of meiotic patterns in
autopolyploid bi-parental F1 populations.
For all ploidy levels, identity-by-descent (IBD) probabilities can be estimated.
Significance thresholds, exploring QTL allele effects and visualising results are provided.
For more background and to reference the package see <doi:10.1093/bioinformatics/btab574>.

Peter Bourke

QTL Analysis in Autopolyploid Bi-Parental F1 Populations

Christine Hackett

Chris Maliepaard

Geert van Geest

Roeland Voorrips

Johan Willemsen

polyqtlR-package function

Maintainer: Peter Bourke <a href="/link/pbourkey%40gmail.com?package=polyqtlR&version=0.1.1" data-mini-rdoc="polyqtlR::pbourkey@gmail.com">pbourkey@gmail.com</a>
Other contributors:<ul>
<li>Christine Hackett [contributor]</li>
<li>Chris Maliepaard [contributor]</li>
<li>Geert van Geest [contributor]</li>
<li>Roeland Voorrips [contributor]</li>
<li>Johan Willemsen [contributor]</li>
</ul>

Author

QTL analysis in polyploid species using posterior genotype probabilities — polyqtlR-package

Maintainer: Peter Bourke <a href='mailto:pbourkey@gmail.com'>pbourkey@gmail.com</a>
Other contributors:<ul>
<li>Christine Hackett [contributor]</li>
<li>Chris Maliepaard [contributor]</li>
<li>Geert van Geest [contributor]</li>
<li>Roeland Voorrips [contributor]</li>
<li>Johan Willemsen [contributor]</li>
</ul>

polyqtlR-package: QTL analysis in polyploid species using posterior genotype probabilities

Description

Arguments

Author