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rJPSGCS (version 0.2-10)

R-Interface to Gene Drop Simulation from JPSGCS

Description

R-interface to gene drop programs from Alun Thomas' Java Programs for Statistical Genetics and Computational Statistics (JPSGCS).

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Version

Install

install.packages('rJPSGCS')

Monthly Downloads

27

Version

0.2-10

License

GPL-3

Maintainer

Brad McNeney

Last Published

May 13th, 2018

Functions in rJPSGCS (0.2-10)

write.pedfile

write a snp.matrix object to a LINKAGE pedigree file.
write.parfile

write a LINKAGE parameter file
read.pedfile

read a LINKAGE pedigree file into a snp.matrix object
FitGMLD

estimate a graphical model for linkage disequilibrium
GeneDrops

simulate genotypes on a pedigree
exdat

example data for rJPSGCS
rJPSGCS-package

R wrappers for JPSGCS gene drop programs.