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s4vd (version 1.1-1)

Biclustering via Sparse Singular Value Decomposition Incorporating Stability Selection

Description

The main function s4vd() performs a biclustering via sparse singular value decomposition with a nested stability selection. The results is an biclust object and thus all methods of the biclust package can be applied.

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Version

Install

install.packages('s4vd')

Monthly Downloads

485

Version

1.1-1

License

GPL-2

Maintainer

Martin Sill

Last Published

November 19th, 2015

Functions in s4vd (1.1-1)

lung200

lung
stabpath

Stability paths plot
jaccardmat

jaccard matrix
BCheatmap

Overlap Heatmap for the visualization of overlapping biclusters
BCs4vd

Robust biclustering by sparse singular value decomposition incorporating stability selection
BCssvd

Biclustering via sparse singular value decomposition