Learn R Programming

⚠️There's a newer version (2.4.1) of this package.Take me there.

strvalidator (version 1.3.0)

Internal validation of forensic STR kits made easy with strvalidator.

Description

strvalidator is an open source platform for validation and process control. It provide tools that make it very easy to perform an internal validation of a forensic short tandem repeat (STR) kit for human identification. The tools are developed to provide all necessary data to conform with the ENFSI guidelines for internal validation. More information about each function can be found in the respective help documentation.

Copy Link

Version

Install

install.packages('strvalidator')

Monthly Downloads

368

Version

1.3.0

License

GPL-2

Issues

Pull Requests

Stars

Forks

Repository

https://github.com/OskarHansson/strvalidator

Homepage

https://sites.google.com/site/forensicapps/strvalidator

Maintainer

Oskar Hansson

Last Published

August 11th, 2014

Functions in strvalidator (1.3.0)

Add dye information

Import GeneMapper.

plotDistribution_gui

Plot Distribution

plotPrecision_gui

ESX17 example data for mixture analysis.

ESX17 example data for dropout analysis.

calculateCapillary_gui

Capillary balance

calculateHeterozygous_gui

Calculate Heterozygous

calculateMixture_gui

Calculate Mixture

Edit or view data frames

ESX17 example data for dropout analysis.

plotStutter_gui

strValidator-package

Simplifies internal validation of forensic STR typing kits

calculateDropout

Calculate drop-out events

Get allele frequency database

modelDropout_gui

model and plot drop-out events

ESX17 example data for mixture analysis.

Graphical user interface for the STR-validator package

calculateResultType

Calculate result type

plotDropout_gui

calculateResultType_gui

Calculate Result Type

plotBalance_gui

filterProfile_gui

Slim data frames

ESX17 example data for dropout analysis.

calculateOverlap

combineBinsAndPanels

combine bins and panels files.

Add color information.

calculateOverlap_gui

Combine two datasets

Import from text file

SGMPlus example data

Crop or replace

calculateOL_gui

Analyse off-ladder alleles

guessProfile_gui

tablePrecision_gui

Calculate Precision

Off-ladder risk

calculateStutter_gui

Calculate Stutters

Plot kit marker ranges

ESX17 Positive Control Profile

Read Panels file

Typing data in 'GeneMapper' format

tableCapillary_gui

Table Capillary

Calculate average peak height

plotCapillary_gui

Plot Capillary Balance

Adds new data columns to a data frame

Add missing markers

calculateBalance_gui

Calculate Balance

calculateBalance

Calculate balance

calculateCapillary

Calculate capillary balance

calculateConcordance

Calculate concordance.

Calculate average peak height.

checkSubset_gui

Check subsetting of a dataset

calculateConcordance_gui

Calculate Concordance

ESX17 example data for mixture analysis.

Calculate precision

Table capillary

calculateMixture

Calculate mixture.

calculateHeterozygous

Calculate heterozygous loci

calculateDropout_gui

Calculate Dropout

Filter out profiles from DNA results

plotResultType_gui

Plot Result Type

SGMPlus example data

ESX17 Positive Control Profile

ESX17 example data for dropout analysis.

Slim data frames

tableStutter_gui

tableBalance_gui

Plot Stutter GUI

Add missing markers.

Add color information.

calculatePeaks_gui

Calculate peaks

calculateStutter

Calculate stutter