Computes Sorensen similarity matrix for biclusters in two bicluster sets
sorensenMat(x, y, type=c("rows", "cols", "both"))BiclustSet object containing row and column indicators of bicluster membership, number of biclusters
BiclustSet object containing row and column indicators of bicluster membership, number of biclusters
whether to compute Sorensen index in two dimensions, row dimension or column dimension
matrix of pairwise Sorensen indices
This function operates on BiclustSet objects and computes pairwise similarity based on the common elements between biclusters. Sorensen similarity score \(so\) for two biclusters A and B is computed as $$so = \frac{2|A\cap B|}{|A| + |B|}$$
similarity,jaccardMat, ochiaiMat, sensitivityMat,
specificityMat,kulczynskiMat