exampleDat

A dataset containing synthetic lethal RNAi screen data to show how functions work.
The variables are as follows:

datasets

Select hits from synthetic lethal RNAi screen data. For
        example, there are two identical celllines except one gene is
        knocked-down in one cellline. The interest is to find genes
        that lead to stronger lethal effect when they are knocked-down
        further by siRNA. Quality control and various visualisation
        tools are implemented. Four different algorithms could be used
        to pick up the interesting hits. This package is designed based
        on 384 wells plates, but may apply to other platforms with
        proper configuration.

Chunxuan Shao

synlet

Hits Selection for Synthetic Lethal RNAi Screen Data

exampleDat function

A data frame with 4320 rows and 8 variables

exampleDat: Synthetic lethal RNAi screen example data.

Description

Usage

Arguments

Value

format

Details