Search and visualize intramolecular triplex-forming sequences in DNA
Description
This package provides functions for identification and
visualization of potential intramolecular triplex patterns in DNA sequence.
The main functionality is to detect the positions of subsequences capable of
folding into an intramolecular triplex (H-DNA) in a much larger sequence.
The potential H-DNA (triplexes) should be made of as many cannonical
nucleotide triplets as possible. The package includes visualization showing
the exact base-pairing in 1D, 2D or 3D.