Learn R Programming

⚠️There's a newer version (6.0-94) of this package.Take me there.

caret (version 6.0-24)

Classification and Regression Training

Description

Misc functions for training and plotting classification and regression models

Copy Link

Version

Install

install.packages('caret')

Monthly Downloads

208,749

Version

6.0-24

License

GPL-2

Maintainer

Last Published

February 16th, 2014

Functions in caret (6.0-24)

BoxCoxTrans.default

Box-Cox and Exponential Transformations
createDataPartition

Data Splitting functions
featurePlot

Wrapper for Lattice Plotting of Predictor Variables
downSample

Down- and Up-Sampling Imbalanced Data
dotPlot

Create a dotplot of variable importance values
plot.varImp.train

Plotting variable importance measures
normalize.AffyBatch.normalize2Reference

Quantile Normalization to a Reference Distribution
dhfr

Dihydrofolate Reductase Inhibitors Data
normalize2Reference

Quantile Normalize Columns of a Matrix Based on a Reference Distribution
cox2

COX-2 Activity Data
knn3

k-Nearest Neighbour Classification
BloodBrain

Blood Brain Barrier Data
histogram.train

Lattice functions for plotting resampling results
avNNet.default

Neural Networks Using Model Averaging
lattice.rfe

Lattice functions for plotting resampling results of recursive feature selection
xyplot.resamples

Lattice Functions for Visualizing Resampling Results
caret-internal

Internal Functions
nearZeroVar

Identification of near zero variance predictors
cars

Kelly Blue Book resale data for 2005 model year GM cars
bagEarth

Bagged Earth
modelLookup

Tools for Models Available in train
confusionMatrix.train

Estimate a Resampled Confusion Matrix
format.bagEarth

Format 'bagEarth' objects
Alternate Affy Gene Expression Summary Methods.

Generate Expression Values from Probes
panel.needle

Needle Plot Lattice Panel
plotObsVsPred

Plot Observed versus Predicted Results in Regression and Classification Models
plot.train

Plot Method for the train Class
sensitivity

Calculate sensitivity, specificity and predictive values
rfeControl

Controlling the Feature Selection Algorithms
postResample

Calculates performance across resamples
dummyVars

Create A Full Set of Dummy Variables
panel.lift2

Lattice Panel Functions for Lift Plots
dotplot.diff.resamples

Lattice Functions for Visualizing Resampling Differences
classDist

Compute and predict the distances to class centroids
predict.bagEarth

Predicted values based on bagged Earth and FDA models
summary.bagEarth

Summarize a bagged earth or FDA fit
bagFDA

Bagged FDA
varImp

Calculation of variable importance for regression and classification models
segmentationData

Cell Body Segmentation
plsda

Partial Least Squares and Sparse Partial Least Squares Discriminant Analysis
rfe

Backwards Feature Selection
predict.knn3

Predictions from k-Nearest Neighbors
oneSE

Selecting tuning Parameters
bag.default

A General Framework For Bagging
predict.train

Extract predictions and class probabilities from train objects
findCorrelation

Determine highly correlated variables
tecator

Fat, Water and Protein Content of Meat Samples
icr.formula

Independent Component Regression
twoClassSim

Two-Class Simulations
lift

Lift Plot
GermanCredit

German Credit Data
mdrr

Multidrug Resistance Reversal (MDRR) Agent Data
filterVarImp

Calculation of filter-based variable importance
prcomp.resamples

Principal Components Analysis of Resampling Results
print.train

Print Method for the train Class
pcaNNet.default

Neural Networks with a Principal Component Step
trainControl

Control parameters for train
update.train

Update or Re-fit a Model
oil

Fatty acid composition of commercial oils
sbfControl

Control Object for Selection By Filtering (SBF)
print.confusionMatrix

Print method for confusionMatrix
resampleSummary

Summary of resampled performance estimates
predict.knnreg

Predictions from k-Nearest Neighbors Regression Model
sbf

Selection By Filtering (SBF)
confusionMatrix

Create a confusion matrix
maxDissim

Maximum Dissimilarity Sampling
plotClassProbs

Plot Predicted Probabilities in Classification Models
nullModel

Fit a simple, non-informative model
caretFuncs

Backwards Feature Selection Helper Functions
resampleHist

Plot the resampling distribution of the model statistics
spatialSign

Compute the multivariate spatial sign
knnreg

k-Nearest Neighbour Regression
caretSBF

Selection By Filtering (SBF) Helper Functions
preProcess

Pre-Processing of Predictors
as.table.confusionMatrix

Save Confusion Table Results
diff.resamples

Inferential Assessments About Model Performance
findLinearCombos

Determine linear combinations in a matrix
plot.rfe

Plot RFE Performance Profiles
predictors

List predictors used in the model
resamples

Collation and Visualization of Resampling Results
pottery

Pottery from Pre-Classical Sites in Italy
calibration

Probability Calibration Plot
train

Fit Predictive Models over Different Tuning Parameters