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distory (version 1.4.5)

Distance Between Phylogenetic Histories

Description

Geodesic distance between phylogenetic trees and associated functions. The theoretical background of 'distory' is published in Billera et al. (2001) "Geometry of the space of phylogenetic trees." .

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Version

Install

install.packages('distory')

Monthly Downloads

690

Version

1.4.5

License

BSD_3_clause + file LICENSE

Maintainer

Emmanuel Paradis

Last Published

October 7th, 2024

Functions in distory (1.4.5)

bethe.tree

Bethe Tree
mcmc.target.seq

Find MCMC Target Sequence
distory-package

Distance Between Phylogenetic Histories
bin.multiPhylo

Bin Trees
position.leverage

Position Leverage
dist.multiPhylo

Geodesic Distance Between Phylogenetic Trees
phylo.diff

Differences Between Phylogenetic Trees
gromov.hyperbolicity

Gromov Hyperbolicity Constant
orthant.boundary.tree

Orthant Boundary Tree