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edge (version 2.4.2)

DGELRT-class: Digital Gene Expression Likelihood Ratio Test data and results - class

Description

A list-based S4 class for storing results of a GLM-based differential expression analysis for DGE data.

Arguments

Methods

This class inherits directly from class list, so DGELRT objects can be manipulated as if they were ordinary lists. However they can also be treated as if they were matrices for the purposes of subsetting.

The dimensions, row names and column names of a DGELRT object are defined by those of table, see dim.DGELRT or dimnames.DGELRT.

DGELRT objects can be subsetted, see subsetting.

DGELRT objects also have a show method so that printing produces a compact summary of their contents.

See Also

Other classes defined in edgeR are DGEList-class, DGEExact-class, DGEGLM-class, TopTags-class