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scape (version 2.3.5)
Statistical Catch-at-Age Plotting Environment
Description
Import, plot, and diagnose results from statistical catch-at-age models, used in fisheries stock assessment.
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Version
2.3.5
2.3.3
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Install
install.packages('scape')
Monthly Downloads
448
Version
2.3.5
License
GPL-3
Issues
0
Pull Requests
0
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0
Forks
0
Repository
https://github.com/arni-magnusson/scape
Maintainer
Arni Magnusson
Last Published
October 22nd, 2024
Functions in scape (2.3.5)
Search all functions
getSigmaI
Extract Abundance Index Sigma
importCol
Import Coleraine Model Results
importProj
Import Coleraine MCMC Projections
scape-package
Statistical Catch-at-Age Plotting Environment
x.cod
Cod Assessment
estSigmaI
Estimate Abundance Index Sigma
plotB
Plot Biomass, Recruitment, and Landings
iterate
Get Candidate Sigmas and Sample Sizes
getSigmaR
Extract Recruitment sigma
plotIndex
Plot Abundance Index
plotCA
Plot Catch at Age
plotCL
Plot Catch at Length
x.saithe
Saithe Assessment
plotLA
Plot Length at Age
xmcmc
MCMC Results from Cod Assessment
xproj
MCMC Projections from Cod Assessment
x.ling
Ling Assessment
x.sbw
Whiting Assessment
x.oreo
Oreo Assessment
plotN
Plot Numbers at Age
plotSel
Plot Selectivity and Maturity
estN
Estimate Effective Sample Size
importADCAM
Import ADCAM Model Results
importMCMC
Import Coleraine MCMC Results
getN
Extract Sample Size
estSigmaR
Estimate Recruitment Sigma