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ORIClust (version 1.0-1)

Order-restricted Information Criterion-based Clustering Algorithm

Description

ORIClust is a user-friendly R-based software package for gene clustering. Clusters are given by genes matched to prespecified profiles across various ordered treatment groups. It is particularly useful for analyzing data obtained from short time-course or dose-response microarray experiments.

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Version

Install

install.packages('ORIClust')

Monthly Downloads

288

Version

1.0-1

License

GPL-2

Maintainer

Last Published

October 29th, 2012

Functions in ORIClust (1.0-1)

ORICC2

Two-stage ORICC
down.up

down.up
isoincre

isoincre
cyclical.max.min

cyclical.max.min
complete.profile

complete.profile
ORICC1

One-stage ORICC
cyclical.min.max

cyclical.min.max
decreasing

decreasing
increasing

increasing
flat.pattern

flat.pattern
ORIClust-package

Order-restricted Information Criterion-based Clustering Algorithm
Breast

Breast cancer cell line data
up.down

up.down
isodecre

isodecre