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Prize (version 1.2.0)

Prize: an R package for prioritization estimation based on analytic hierarchy process

Description

The high throughput studies often produce large amounts of numerous genes and proteins of interest. While it is difficult to study and validate all of them. Analytic Hierarchy Process (AHP) offers a novel approach to narrowing down long lists of candidates by prioritizing them based on how well they meet the research goal. AHP is a mathematical technique for organizing and analyzing complex decisions where multiple criteria are involved. The technique structures problems into a hierarchy of elements, and helps to specify numerical weights representing the relative importance of each element. Numerical weight or priority derived from each element allows users to find alternatives that best suit their goal and their understanding of the problem.

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Version

Version

1.2.0

License

Artistic-2.0

Maintainer

Daryanaz Dargahi

Last Published

February 15th, 2017

Functions in Prize (1.2.0)

CI

Consistency index (CI) slot
AIP

Aggregated individual priorities (AIP) slot
RM

Rating matrix (RM) slot
GCR

Group consistency ratio (GCR) slot
simulation

Simulation slot
dplot

dplot
AIJ

Aggregated individual judgements (AIJ) slot
ariAggreg-class

Class ariAggreg
IP

Individual priority (IP) slot
epitopeLength.PCM-data

A pairwise comparison matrix (PCM)
ind2-data

An individual judgement matrix
ahplot

ahplot
ahpObj-class

Class ahpObj
normal.PCM-data

A pairwise comparison matrix (PCM)
ahp_weights

AHP weights slot
epitope_size_rating-data

Rating categories and idealised priorities
epitope.PCM-data

A pairwise comparison matrix (PCM)
normal_exp_rating-data

Rating categories and idealised priorities
gaggregate

gaggregate
epitopeNum.PCM-data

A pairwise comparison matrix (PCM)
ind4-data

An individual judgement matrix
genes.list-data

A pairwise comparison matrix (PCM)
pipeline

pipeline
ratingObj-class

Class ratingObj
numEpitope_alternative_category-data

A pairwise comparison matrix (PCM)
ahmatrix

ahmatrix
weight_plot

Weight plot slot
wplot

Wplot
number-data

A pairwise comparison matrix (PCM)
epitope_num_rating-data

Rating categories and idealised priorities
geoAggreg-class

Class geoAggreg
freq_exp_rating-data

Rating categories and idealised priorities
ind1-data

An individual judgement matrix
freq.PCM-data

A pairwise comparison matrix (PCM)
pipelineObj-class

Class pipelineObj
weight

Weight slot
ahmatrixObj-class

Class ahmatrixObj
ahp

ahp
ahp_matrix

AHP matrix slot
tumor_exp_rating-data

Rating categories and idealised priorities
rainbowplot

rainbowplot
ind3-data

An individual judgement matrix
ICR

Individual consistency ratio (ICR) slot
Prize-package

Prize: an R package for prioritization estimation based on analytic hierarchy process
rainbow_plot

Rainbow plot slot
aggreg.judgement-data

A pairwise comparison matrix (PCM)
rating

rating
saaty_inconsistency

Saaty inconsistency slot
ahp_plot

AHP plot slot
tumor.PCM-data

A pairwise comparison matrix (PCM)
crplot

crplot