destiny (version 2.0.4)

DiffusionMap accessors: DiffusionMap accession methods

Description

Get and set eigenvalues, eigenvectors, and sigma(s) of a DiffusionMap object or print information about a DiffusionMap

Usage

# S4 method for DiffusionMap
eigenvalues(object)
# S4 method for DiffusionMap
eigenvalues(object) <- value
# S4 method for DiffusionMap
eigenvectors(object)
# S4 method for DiffusionMap
eigenvectors(object) <- value
# S4 method for DiffusionMap
sigmas(object)
# S4 method for DiffusionMap
sigmas(object) <- value
# S4 method for DiffusionMap
dataset(object)
# S4 method for DiffusionMap
dataset(object) <- value
# S4 method for DiffusionMap
distance(object)
# S4 method for DiffusionMap
distance(object) <- value
# S4 method for DiffusionMap
optimal_sigma(object)

Arguments

object

A DiffusionMap

value

Vector of eigenvalues or matrix of eigenvectors to get/set

Value

The assigned or retrieved value

See Also

extractions, DiffusionMap methods, coercions for more methods

Examples

data(guo)
dm <- DiffusionMap(guo)
eigenvalues(dm)
eigenvectors(dm)
sigmas(dm)
dataset(dm)
optimal_sigma(dm)